Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.59■□□□□ 0.89
NCLP19338 FLJ38576-201ENST00000623820 2459 ntBASIC20.59■□□□□ 0.89
NCLP19338 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.59■□□□□ 0.89
NCLP19338 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.59■□□□□ 0.89
NCLP19338 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.59■□□□□ 0.89
NCLP19338 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.59■□□□□ 0.89
NCLP19338 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.59■□□□□ 0.89
NCLP19338 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.59■□□□□ 0.89
NCLP19338 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.59■□□□□ 0.89
NCLP19338 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.59■□□□□ 0.89
NCLP19338 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
NCLP19338 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.59■□□□□ 0.89
NCLP19338 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
NCLP19338 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NCLP19338 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NCLP19338 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.59■□□□□ 0.89
NCLP19338 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
NCLP19338 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NCLP19338 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCLP19338 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
NCLP19338 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
NCLP19338 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
NCLP19338 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
NCLP19338 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
NCLP19338 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCLP19338 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCLP19338 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
NCLP19338 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
NCLP19338 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
NCLP19338 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.58■□□□□ 0.89
NCLP19338 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCLP19338 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCLP19338 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCLP19338 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCLP19338 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NCLP19338 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCLP19338 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.58■□□□□ 0.89
NCLP19338 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.58■□□□□ 0.89
NCLP19338 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.58■□□□□ 0.89
NCLP19338 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.58■□□□□ 0.89
NCLP19338 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.58■□□□□ 0.89
NCLP19338 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.58■□□□□ 0.89
NCLP19338 AL157888.1-201ENST00000631930 593 ntBASIC20.58■□□□□ 0.89
NCLP19338 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.58■□□□□ 0.88
NCLP19338 REXO1L11P-201ENST00000620964 1927 ntBASIC20.58■□□□□ 0.88
NCLP19338 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.58■□□□□ 0.88
NCLP19338 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NCLP19338 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NCLP19338 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
NCLP19338 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NCLP19338 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCLP19338 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NCLP19338 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NCLP19338 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCLP19338 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NCLP19338 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NCLP19338 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NCLP19338 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NCLP19338 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCLP19338 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NCLP19338 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCLP19338 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NCLP19338 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NCLP19338 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NCLP19338 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCLP19338 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.57■□□□□ 0.88
NCLP19338 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.57■□□□□ 0.88
NCLP19338 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCLP19338 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.57■□□□□ 0.88
NCLP19338 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC20.57■□□□□ 0.88
NCLP19338 LINC02199-201ENST00000506655 2702 ntBASIC20.57■□□□□ 0.88
NCLP19338 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.57■□□□□ 0.88
NCLP19338 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCLP19338 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCLP19338 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NCLP19338 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCLP19338 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCLP19338 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCLP19338 AL162727.3-201ENST00000635661 2787 ntBASIC20.57■□□□□ 0.88
NCLP19338 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCLP19338 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCLP19338 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NCLP19338 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms