Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCF4P15884 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TCF4P15884 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TCF4P15884 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TCF4P15884 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TCF4P15884 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TCF4P15884 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TCF4P15884 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
TCF4P15884 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TCF4P15884 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.97■□□□□ 0.47
TCF4P15884 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.97■□□□□ 0.47
TCF4P15884 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
TCF4P15884 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.97■□□□□ 0.47
TCF4P15884 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.97■□□□□ 0.47
TCF4P15884 SIGLEC30P-201ENST00000455569 941 ntBASIC17.97■□□□□ 0.47
TCF4P15884 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.97■□□□□ 0.47
TCF4P15884 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.97■□□□□ 0.47
TCF4P15884 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.97■□□□□ 0.47
TCF4P15884 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TCF4P15884 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
TCF4P15884 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
TCF4P15884 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TCF4P15884 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TCF4P15884 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TCF4P15884 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
TCF4P15884 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TCF4P15884 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TCF4P15884 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.96■□□□□ 0.47
TCF4P15884 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.96■□□□□ 0.47
TCF4P15884 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCF4P15884 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TCF4P15884 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCF4P15884 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCF4P15884 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCF4P15884 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCF4P15884 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCF4P15884 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCF4P15884 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCF4P15884 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TCF4P15884 KRT18P31-201ENST00000506277 1292 ntBASIC17.96■□□□□ 0.47
TCF4P15884 AC106795.1-205ENST00000512851 1056 ntBASIC17.96■□□□□ 0.47
TCF4P15884 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TCF4P15884 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TCF4P15884 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.96■□□□□ 0.47
TCF4P15884 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCF4P15884 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TCF4P15884 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
TCF4P15884 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TCF4P15884 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TCF4P15884 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.96■□□□□ 0.47
TCF4P15884 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TCF4P15884 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.96■□□□□ 0.46
TCF4P15884 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TCF4P15884 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TCF4P15884 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCF4P15884 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCF4P15884 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCF4P15884 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.95■□□□□ 0.46
TCF4P15884 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCF4P15884 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.95■□□□□ 0.46
TCF4P15884 PCDHA14-201ENST00000506751 2298 ntBASIC17.95■□□□□ 0.46
TCF4P15884 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.95■□□□□ 0.46
TCF4P15884 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TCF4P15884 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCF4P15884 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
TCF4P15884 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.95■□□□□ 0.46
TCF4P15884 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.95■□□□□ 0.46
TCF4P15884 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TCF4P15884 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.95■□□□□ 0.46
TCF4P15884 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TCF4P15884 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCF4P15884 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.95■□□□□ 0.46
TCF4P15884 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.95■□□□□ 0.46
TCF4P15884 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCF4P15884 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCF4P15884 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms