Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC6P09630 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HOXC6P09630 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXC6P09630 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HOXC6P09630 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HOXC6P09630 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC6P09630 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC6P09630 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC6P09630 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC6P09630 AL390961.4-201ENST00000623958 2535 ntBASIC19.36■□□□□ 0.69
HOXC6P09630 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXC6P09630 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC6P09630 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXC6P09630 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC6P09630 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXC6P09630 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
HOXC6P09630 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
HOXC6P09630 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXC6P09630 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC6P09630 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC6P09630 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXC6P09630 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC6P09630 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC6P09630 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.36■□□□□ 0.69
HOXC6P09630 MIR943-201ENST00000401286 94 ntBASIC19.36■□□□□ 0.69
HOXC6P09630 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.36■□□□□ 0.69
HOXC6P09630 AC015922.1-201ENST00000421102 1152 ntBASIC19.36■□□□□ 0.69
HOXC6P09630 AC107890.1-201ENST00000422478 521 ntBASIC19.36■□□□□ 0.69
HOXC6P09630 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HOXC6P09630 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HOXC6P09630 AC087641.1-201ENST00000557561 1021 ntBASIC19.36■□□□□ 0.69
HOXC6P09630 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXC6P09630 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXC6P09630 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXC6P09630 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXC6P09630 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC6P09630 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC6P09630 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXC6P09630 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXC6P09630 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC6P09630 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC6P09630 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC6P09630 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC6P09630 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC6P09630 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXC6P09630 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC6P09630 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC6P09630 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC6P09630 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC6P09630 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC6P09630 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HOXC6P09630 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC6P09630 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC6P09630 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC6P09630 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXC6P09630 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC6P09630 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC6P09630 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC6P09630 RBPMS2P1-201ENST00000437762 623 ntBASIC19.35■□□□□ 0.69
HOXC6P09630 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.35■□□□□ 0.69
HOXC6P09630 AC002472.2-201ENST00000442739 958 ntBASIC19.35■□□□□ 0.69
HOXC6P09630 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.35■□□□□ 0.69
HOXC6P09630 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HOXC6P09630 AC109635.5-201ENST00000533593 962 ntBASIC19.35■□□□□ 0.69
HOXC6P09630 AC140878.1-201ENST00000565277 250 ntBASIC19.35■□□□□ 0.69
HOXC6P09630 RN7SL204P-201ENST00000582831 262 ntBASIC19.35■□□□□ 0.69
HOXC6P09630 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.35■□□□□ 0.69
HOXC6P09630 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC6P09630 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HOXC6P09630 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC6P09630 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.35■□□□□ 0.69
HOXC6P09630 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HOXC6P09630 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC6P09630 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
HOXC6P09630 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC6P09630 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC6P09630 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC6P09630 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC6P09630 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXC6P09630 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC6P09630 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC6P09630 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HOXC6P09630 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC6P09630 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXC6P09630 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.34■□□□□ 0.69
HOXC6P09630 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXC6P09630 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC6P09630 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC6P09630 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXC6P09630 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXC6P09630 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC6P09630 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXC6P09630 MIR661-201ENST00000384842 89 ntBASIC19.34■□□□□ 0.69
HOXC6P09630 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.34■□□□□ 0.69
HOXC6P09630 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.34■□□□□ 0.69
HOXC6P09630 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.34■□□□□ 0.69
HOXC6P09630 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC6P09630 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXC6P09630 AL009183.1-201ENST00000603760 355 ntBASIC19.34■□□□□ 0.69
HOXC6P09630 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms