Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSDP07339 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.35□□□□□ -0.11
CTSDP07339 MTCL1P1-201ENST00000446207 792 ntBASIC14.35□□□□□ -0.11
CTSDP07339 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.35□□□□□ -0.11
CTSDP07339 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 AL355075.4-201ENST00000554988 638 ntBASIC14.35□□□□□ -0.11
CTSDP07339 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.35□□□□□ -0.11
CTSDP07339 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.35□□□□□ -0.11
CTSDP07339 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.35□□□□□ -0.11
CTSDP07339 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 AC097374.2-201ENST00000618617 1306 ntBASIC14.35□□□□□ -0.11
CTSDP07339 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSDP07339 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSDP07339 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSDP07339 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CTSDP07339 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.35□□□□□ -0.11
CTSDP07339 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.35□□□□□ -0.11
CTSDP07339 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.35□□□□□ -0.11
CTSDP07339 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSDP07339 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSDP07339 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSDP07339 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CTSDP07339 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CTSDP07339 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSDP07339 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSDP07339 HMGA1P5-201ENST00000412453 271 ntBASIC14.34□□□□□ -0.11
CTSDP07339 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CTSDP07339 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSDP07339 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSDP07339 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSDP07339 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.34□□□□□ -0.11
CTSDP07339 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.34□□□□□ -0.11
CTSDP07339 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSDP07339 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CTSDP07339 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSDP07339 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.34□□□□□ -0.11
CTSDP07339 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSDP07339 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSDP07339 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CTSDP07339 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSDP07339 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CTSDP07339 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTSDP07339 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTSDP07339 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.33□□□□□ -0.11
CTSDP07339 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CTSDP07339 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTSDP07339 AL391807.1-203ENST00000604392 2365 ntBASIC14.33□□□□□ -0.11
CTSDP07339 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTSDP07339 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSDP07339 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSDP07339 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSDP07339 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.33□□□□□ -0.12
CTSDP07339 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSDP07339 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSDP07339 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CTSDP07339 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.33□□□□□ -0.12
CTSDP07339 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTSDP07339 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTSDP07339 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CTSDP07339 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTSDP07339 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CTSDP07339 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CTSDP07339 AP002490.2-201ENST00000524791 560 ntBASIC14.33□□□□□ -0.12
CTSDP07339 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTSDP07339 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.33□□□□□ -0.12
CTSDP07339 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.33□□□□□ -0.12
CTSDP07339 AL136038.4-201ENST00000603606 1261 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms