Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR3DP05423 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR3DP05423 AL135999.2-201ENST00000622438 1686 ntBASIC20.61■□□□□ 0.89
POLR3DP05423 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR3DP05423 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
POLR3DP05423 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
POLR3DP05423 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.61■□□□□ 0.89
POLR3DP05423 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.61■□□□□ 0.89
POLR3DP05423 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR3DP05423 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.61■□□□□ 0.89
POLR3DP05423 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.61■□□□□ 0.89
POLR3DP05423 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR3DP05423 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
POLR3DP05423 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.61■□□□□ 0.89
POLR3DP05423 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
POLR3DP05423 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.61■□□□□ 0.89
POLR3DP05423 BX842568.4-201ENST00000421222 227 ntBASIC20.61■□□□□ 0.89
POLR3DP05423 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
POLR3DP05423 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
POLR3DP05423 AC108073.2-201ENST00000464002 357 ntBASIC20.61■□□□□ 0.89
POLR3DP05423 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.61■□□□□ 0.89
POLR3DP05423 MIR4751-201ENST00000578027 74 ntBASIC20.61■□□□□ 0.89
POLR3DP05423 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.61■□□□□ 0.89
POLR3DP05423 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
POLR3DP05423 AC064836.3-201ENST00000607928 673 ntBASIC20.61■□□□□ 0.89
POLR3DP05423 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.61■□□□□ 0.89
POLR3DP05423 AL805961.1-202ENST00000641562 540 ntBASIC20.61■□□□□ 0.89
POLR3DP05423 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
POLR3DP05423 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.61■□□□□ 0.89
POLR3DP05423 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR3DP05423 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.61■□□□□ 0.89
POLR3DP05423 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3DP05423 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3DP05423 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3DP05423 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.6■□□□□ 0.89
POLR3DP05423 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.6■□□□□ 0.89
POLR3DP05423 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.6■□□□□ 0.89
POLR3DP05423 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3DP05423 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3DP05423 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3DP05423 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
POLR3DP05423 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.6■□□□□ 0.89
POLR3DP05423 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3DP05423 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.6■□□□□ 0.89
POLR3DP05423 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3DP05423 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
POLR3DP05423 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3DP05423 CRYGEP-201ENST00000412192 528 ntBASIC20.6■□□□□ 0.89
POLR3DP05423 ACTG1P4-201ENST00000425123 1122 ntBASIC20.6■□□□□ 0.89
POLR3DP05423 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.6■□□□□ 0.89
POLR3DP05423 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3DP05423 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.6■□□□□ 0.89
POLR3DP05423 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.6■□□□□ 0.89
POLR3DP05423 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
POLR3DP05423 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3DP05423 AC004790.2-201ENST00000623588 572 ntBASIC20.6■□□□□ 0.89
POLR3DP05423 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3DP05423 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3DP05423 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
POLR3DP05423 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.6■□□□□ 0.89
POLR3DP05423 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3DP05423 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3DP05423 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3DP05423 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.59■□□□□ 0.89
POLR3DP05423 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
POLR3DP05423 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3DP05423 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3DP05423 OR6D1P-202ENST00000641007 5290 ntBASIC20.59■□□□□ 0.89
POLR3DP05423 AC012313.1-201ENST00000593393 3059 ntBASIC20.59■□□□□ 0.89
POLR3DP05423 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
POLR3DP05423 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.59■□□□□ 0.89
POLR3DP05423 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.59■□□□□ 0.89
POLR3DP05423 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.59■□□□□ 0.89
POLR3DP05423 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
POLR3DP05423 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
POLR3DP05423 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3DP05423 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3DP05423 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3DP05423 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3DP05423 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.59■□□□□ 0.89
POLR3DP05423 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3DP05423 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.58■□□□□ 0.89
POLR3DP05423 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
POLR3DP05423 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3DP05423 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3DP05423 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3DP05423 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.58■□□□□ 0.89
POLR3DP05423 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3DP05423 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3DP05423 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.89
POLR3DP05423 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3DP05423 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3DP05423 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3DP05423 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3DP05423 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3DP05423 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.58■□□□□ 0.89
POLR3DP05423 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.58■□□□□ 0.89
POLR3DP05423 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.58■□□□□ 0.89
POLR3DP05423 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.58■□□□□ 0.89
POLR3DP05423 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms