Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
VTNP04004 AC068137.2-201ENST00000605408 478 ntBASIC18.82■□□□□ 0.6
VTNP04004 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.82■□□□□ 0.6
VTNP04004 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VTNP04004 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VTNP04004 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.82■□□□□ 0.6
VTNP04004 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VTNP04004 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VTNP04004 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VTNP04004 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.82■□□□□ 0.6
VTNP04004 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VTNP04004 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VTNP04004 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VTNP04004 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VTNP04004 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTNP04004 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTNP04004 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.81■□□□□ 0.6
VTNP04004 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTNP04004 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.81■□□□□ 0.6
VTNP04004 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
VTNP04004 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTNP04004 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTNP04004 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.81■□□□□ 0.6
VTNP04004 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.81■□□□□ 0.6
VTNP04004 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VTNP04004 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTNP04004 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.81■□□□□ 0.6
VTNP04004 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
VTNP04004 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.81■□□□□ 0.6
VTNP04004 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.81■□□□□ 0.6
VTNP04004 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VTNP04004 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTNP04004 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.81■□□□□ 0.6
VTNP04004 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.81■□□□□ 0.6
VTNP04004 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTNP04004 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTNP04004 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTNP04004 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTNP04004 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.81■□□□□ 0.6
VTNP04004 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
VTNP04004 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
VTNP04004 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTNP04004 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTNP04004 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
VTNP04004 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VTNP04004 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTNP04004 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VTNP04004 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
VTNP04004 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VTNP04004 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.8■□□□□ 0.6
VTNP04004 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.8■□□□□ 0.6
VTNP04004 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTNP04004 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.8■□□□□ 0.6
VTNP04004 AC254562.1-201ENST00000417586 456 ntBASIC18.8■□□□□ 0.6
VTNP04004 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.8■□□□□ 0.6
VTNP04004 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTNP04004 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VTNP04004 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
VTNP04004 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.8■□□□□ 0.6
VTNP04004 AC092902.6-201ENST00000641783 218 ntBASIC18.8■□□□□ 0.6
VTNP04004 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.8■□□□□ 0.6
VTNP04004 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTNP04004 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.8■□□□□ 0.6
VTNP04004 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTNP04004 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.8■□□□□ 0.6
VTNP04004 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTNP04004 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.8■□□□□ 0.6
VTNP04004 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VTNP04004 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VTNP04004 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTNP04004 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTNP04004 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTNP04004 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
VTNP04004 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VTNP04004 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
VTNP04004 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VTNP04004 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VTNP04004 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
VTNP04004 AL133373.2-201ENST00000623187 2828 ntBASIC18.79■□□□□ 0.6
VTNP04004 AC067852.2-201ENST00000590513 2313 ntBASIC18.79■□□□□ 0.6
VTNP04004 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VTNP04004 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VTNP04004 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.79■□□□□ 0.6
VTNP04004 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VTNP04004 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VTNP04004 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VTNP04004 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.79■□□□□ 0.6
VTNP04004 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
VTNP04004 CNN2P11-201ENST00000429351 262 ntBASIC18.79■□□□□ 0.6
VTNP04004 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.79■□□□□ 0.6
VTNP04004 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.79■□□□□ 0.6
VTNP04004 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.79■□□□□ 0.6
VTNP04004 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.79■□□□□ 0.6
VTNP04004 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.79■□□□□ 0.6
VTNP04004 AP002472.1-201ENST00000577490 586 ntBASIC18.79■□□□□ 0.6
VTNP04004 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.79■□□□□ 0.6
VTNP04004 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.79■□□□□ 0.6
VTNP04004 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.79■□□□□ 0.6
VTNP04004 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VTNP04004 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms