Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND1P03886 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
MT-ND1P03886 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
MT-ND1P03886 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND1P03886 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.33■□□□□ 0.2
MT-ND1P03886 AC087499.1-201ENST00000418141 1075 ntBASIC16.33■□□□□ 0.2
MT-ND1P03886 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.33■□□□□ 0.2
MT-ND1P03886 AC005104.2-201ENST00000427818 678 ntBASIC16.33■□□□□ 0.2
MT-ND1P03886 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.33■□□□□ 0.2
MT-ND1P03886 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.33■□□□□ 0.2
MT-ND1P03886 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.33■□□□□ 0.2
MT-ND1P03886 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.33■□□□□ 0.2
MT-ND1P03886 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.33■□□□□ 0.2
MT-ND1P03886 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.33■□□□□ 0.2
MT-ND1P03886 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.33■□□□□ 0.2
MT-ND1P03886 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND1P03886 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND1P03886 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND1P03886 AC093525.9-201ENST00000624961 1746 ntBASIC16.33■□□□□ 0.2
MT-ND1P03886 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
MT-ND1P03886 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
MT-ND1P03886 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND1P03886 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND1P03886 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
MT-ND1P03886 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.33■□□□□ 0.2
MT-ND1P03886 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.32■□□□□ 0.2
MT-ND1P03886 SLC25A3P1-201ENST00000443844 931 ntBASIC16.32■□□□□ 0.2
MT-ND1P03886 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
MT-ND1P03886 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.32■□□□□ 0.2
MT-ND1P03886 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MT-ND1P03886 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
MT-ND1P03886 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
MT-ND1P03886 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
MT-ND1P03886 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.32■□□□□ 0.2
MT-ND1P03886 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.32■□□□□ 0.2
MT-ND1P03886 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.32■□□□□ 0.2
MT-ND1P03886 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.32■□□□□ 0.2
MT-ND1P03886 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
MT-ND1P03886 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.32■□□□□ 0.2
MT-ND1P03886 AL139327.4-201ENST00000612362 153 ntBASIC16.32■□□□□ 0.2
MT-ND1P03886 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.32■□□□□ 0.2
MT-ND1P03886 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
MT-ND1P03886 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND1P03886 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND1P03886 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.31■□□□□ 0.2
MT-ND1P03886 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MT-ND1P03886 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND1P03886 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.31■□□□□ 0.2
MT-ND1P03886 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.31■□□□□ 0.2
MT-ND1P03886 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND1P03886 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.31■□□□□ 0.2
MT-ND1P03886 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.31■□□□□ 0.2
MT-ND1P03886 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.31■□□□□ 0.2
MT-ND1P03886 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND1P03886 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.31■□□□□ 0.2
MT-ND1P03886 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MT-ND1P03886 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND1P03886 AC066615.1-201ENST00000640911 628 ntBASIC16.31■□□□□ 0.2
MT-ND1P03886 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND1P03886 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
MT-ND1P03886 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.31■□□□□ 0.2
MT-ND1P03886 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.31■□□□□ 0.2
MT-ND1P03886 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND1P03886 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND1P03886 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MT-ND1P03886 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MT-ND1P03886 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND1P03886 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND1P03886 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND1P03886 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND1P03886 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND1P03886 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.31■□□□□ 0.2
MT-ND1P03886 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND1P03886 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MT-ND1P03886 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND1P03886 KRT89P-201ENST00000620027 1478 ntBASIC16.3■□□□□ 0.2
MT-ND1P03886 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND1P03886 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND1P03886 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MT-ND1P03886 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND1P03886 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms