Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL1A1P02452 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL1A1P02452 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL1A1P02452 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.57■□□□□ 0.88
COL1A1P02452 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL1A1P02452 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.57■□□□□ 0.88
COL1A1P02452 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL1A1P02452 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL1A1P02452 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.57■□□□□ 0.88
COL1A1P02452 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.56■□□□□ 0.88
COL1A1P02452 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A1P02452 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
COL1A1P02452 AC005412.3-201ENST00000580309 715 ntBASIC20.56■□□□□ 0.88
COL1A1P02452 LINC00628-201ENST00000628516 1289 ntBASIC20.56■□□□□ 0.88
COL1A1P02452 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A1P02452 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A1P02452 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
COL1A1P02452 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A1P02452 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
COL1A1P02452 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.56■□□□□ 0.88
COL1A1P02452 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A1P02452 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
COL1A1P02452 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.56■□□□□ 0.88
COL1A1P02452 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.56■□□□□ 0.88
COL1A1P02452 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A1P02452 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A1P02452 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A1P02452 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A1P02452 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A1P02452 AC016396.2-201ENST00000562575 1417 ntBASIC20.56■□□□□ 0.88
COL1A1P02452 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
COL1A1P02452 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A1P02452 AL627223.1-201ENST00000416693 442 ntBASIC20.56■□□□□ 0.88
COL1A1P02452 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.56■□□□□ 0.88
COL1A1P02452 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
COL1A1P02452 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
COL1A1P02452 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.56■□□□□ 0.88
COL1A1P02452 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.56■□□□□ 0.88
COL1A1P02452 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.56■□□□□ 0.88
COL1A1P02452 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A1P02452 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
COL1A1P02452 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A1P02452 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.55■□□□□ 0.88
COL1A1P02452 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A1P02452 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.55■□□□□ 0.88
COL1A1P02452 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.55■□□□□ 0.88
COL1A1P02452 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A1P02452 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A1P02452 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A1P02452 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A1P02452 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A1P02452 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A1P02452 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A1P02452 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
COL1A1P02452 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.55■□□□□ 0.88
COL1A1P02452 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A1P02452 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.55■□□□□ 0.88
COL1A1P02452 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A1P02452 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.55■□□□□ 0.88
COL1A1P02452 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.55■□□□□ 0.88
COL1A1P02452 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.55■□□□□ 0.88
COL1A1P02452 MIR4515-201ENST00000584082 81 ntBASIC20.55■□□□□ 0.88
COL1A1P02452 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A1P02452 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.55■□□□□ 0.88
COL1A1P02452 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A1P02452 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A1P02452 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
COL1A1P02452 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A1P02452 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A1P02452 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL1A1P02452 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.54■□□□□ 0.88
COL1A1P02452 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A1P02452 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A1P02452 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.54■□□□□ 0.88
COL1A1P02452 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A1P02452 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
COL1A1P02452 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A1P02452 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A1P02452 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
COL1A1P02452 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A1P02452 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
COL1A1P02452 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A1P02452 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A1P02452 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A1P02452 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A1P02452 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A1P02452 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A1P02452 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A1P02452 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.54■□□□□ 0.88
COL1A1P02452 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.54■□□□□ 0.88
COL1A1P02452 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
COL1A1P02452 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.54■□□□□ 0.88
COL1A1P02452 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.54■□□□□ 0.88
COL1A1P02452 AJ011932.1-201ENST00000621707 465 ntBASIC20.54■□□□□ 0.88
COL1A1P02452 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.54■□□□□ 0.88
COL1A1P02452 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.54■□□□□ 0.88
COL1A1P02452 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.54■□□□□ 0.88
COL1A1P02452 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL1A1P02452 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.54■□□□□ 0.88
COL1A1P02452 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms