Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 LINC00304-203ENST00000565008 1864 ntBASIC15.52■□□□□ 0.07
UBL3O95164 NSUN5P1-202ENST00000421140 1535 ntBASIC15.52■□□□□ 0.07
UBL3O95164 NSUN5P2-203ENST00000457352 1529 ntBASIC15.52■□□□□ 0.07
UBL3O95164 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBL3O95164 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBL3O95164 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBL3O95164 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.52■□□□□ 0.07
UBL3O95164 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.51■□□□□ 0.07
UBL3O95164 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBL3O95164 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.51■□□□□ 0.07
UBL3O95164 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL3O95164 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
UBL3O95164 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBL3O95164 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBL3O95164 HLA-J-201ENST00000462773 1622 ntBASIC15.51■□□□□ 0.07
UBL3O95164 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.51■□□□□ 0.07
UBL3O95164 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL3O95164 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL3O95164 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
UBL3O95164 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL3O95164 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBL3O95164 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.51■□□□□ 0.07
UBL3O95164 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.51■□□□□ 0.07
UBL3O95164 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL3O95164 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.51■□□□□ 0.07
UBL3O95164 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL3O95164 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
UBL3O95164 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL3O95164 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.51■□□□□ 0.07
UBL3O95164 IGHV3-47-201ENST00000425060 335 ntBASIC15.51■□□□□ 0.07
UBL3O95164 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.51■□□□□ 0.07
UBL3O95164 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.51■□□□□ 0.07
UBL3O95164 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBL3O95164 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.51■□□□□ 0.07
UBL3O95164 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.51■□□□□ 0.07
UBL3O95164 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.51■□□□□ 0.07
UBL3O95164 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
UBL3O95164 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
UBL3O95164 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.51■□□□□ 0.07
UBL3O95164 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.51■□□□□ 0.07
UBL3O95164 MIR3652-201ENST00000579335 131 ntBASIC15.51■□□□□ 0.07
UBL3O95164 AP005901.3-202ENST00000581653 237 ntBASIC15.51■□□□□ 0.07
UBL3O95164 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
UBL3O95164 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.51■□□□□ 0.07
UBL3O95164 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
UBL3O95164 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL3O95164 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL3O95164 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL3O95164 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL3O95164 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.51■□□□□ 0.07
UBL3O95164 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.51■□□□□ 0.07
UBL3O95164 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
UBL3O95164 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
UBL3O95164 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
UBL3O95164 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
UBL3O95164 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBL3O95164 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.5■□□□□ 0.07
UBL3O95164 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
UBL3O95164 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
UBL3O95164 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
UBL3O95164 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.5■□□□□ 0.07
UBL3O95164 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.5■□□□□ 0.07
UBL3O95164 POM121L3P-201ENST00000419331 1163 ntBASIC15.5■□□□□ 0.07
UBL3O95164 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.5■□□□□ 0.07
UBL3O95164 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.5■□□□□ 0.07
UBL3O95164 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.5■□□□□ 0.07
UBL3O95164 AC091607.1-201ENST00000490318 1060 ntBASIC15.5■□□□□ 0.07
UBL3O95164 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.5■□□□□ 0.07
UBL3O95164 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.5■□□□□ 0.07
UBL3O95164 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.5■□□□□ 0.07
UBL3O95164 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.5■□□□□ 0.07
UBL3O95164 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.5■□□□□ 0.07
UBL3O95164 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.5■□□□□ 0.07
UBL3O95164 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
UBL3O95164 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.5■□□□□ 0.07
UBL3O95164 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.5■□□□□ 0.07
UBL3O95164 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBL3O95164 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms