Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.16■□□□□ 0.34
KLHL41O60662 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.16■□□□□ 0.34
KLHL41O60662 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.16■□□□□ 0.34
KLHL41O60662 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
KLHL41O60662 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.16■□□□□ 0.34
KLHL41O60662 CICP6-201ENST00000457191 2729 ntBASIC17.16■□□□□ 0.34
KLHL41O60662 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
KLHL41O60662 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.16■□□□□ 0.34
KLHL41O60662 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.16■□□□□ 0.34
KLHL41O60662 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.16■□□□□ 0.34
KLHL41O60662 PVRIG2P-201ENST00000435460 978 ntBASIC17.16■□□□□ 0.34
KLHL41O60662 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.16■□□□□ 0.34
KLHL41O60662 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
KLHL41O60662 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.16■□□□□ 0.34
KLHL41O60662 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.16■□□□□ 0.34
KLHL41O60662 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.16■□□□□ 0.34
KLHL41O60662 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
KLHL41O60662 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.16■□□□□ 0.34
KLHL41O60662 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
KLHL41O60662 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
KLHL41O60662 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.16■□□□□ 0.34
KLHL41O60662 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
KLHL41O60662 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KLHL41O60662 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.16■□□□□ 0.34
KLHL41O60662 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KLHL41O60662 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
KLHL41O60662 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
KLHL41O60662 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KLHL41O60662 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KLHL41O60662 DOC2GP-204ENST00000639052 2548 ntBASIC17.15■□□□□ 0.34
KLHL41O60662 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KLHL41O60662 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KLHL41O60662 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KLHL41O60662 AC008741.2-201ENST00000612792 3115 ntBASIC17.15■□□□□ 0.34
KLHL41O60662 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.15■□□□□ 0.34
KLHL41O60662 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KLHL41O60662 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
KLHL41O60662 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KLHL41O60662 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
KLHL41O60662 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
KLHL41O60662 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KLHL41O60662 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.15■□□□□ 0.34
KLHL41O60662 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.15■□□□□ 0.34
KLHL41O60662 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.15■□□□□ 0.34
KLHL41O60662 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.15■□□□□ 0.34
KLHL41O60662 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.15■□□□□ 0.34
KLHL41O60662 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.15■□□□□ 0.34
KLHL41O60662 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.15■□□□□ 0.34
KLHL41O60662 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.15■□□□□ 0.34
KLHL41O60662 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.15■□□□□ 0.34
KLHL41O60662 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.15■□□□□ 0.34
KLHL41O60662 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.15■□□□□ 0.34
KLHL41O60662 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.15■□□□□ 0.34
KLHL41O60662 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.15■□□□□ 0.34
KLHL41O60662 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KLHL41O60662 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
KLHL41O60662 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KLHL41O60662 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KLHL41O60662 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KLHL41O60662 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KLHL41O60662 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.15■□□□□ 0.34
KLHL41O60662 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KLHL41O60662 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
KLHL41O60662 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL41O60662 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL41O60662 AC016396.2-201ENST00000562575 1417 ntBASIC17.14■□□□□ 0.33
KLHL41O60662 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL41O60662 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL41O60662 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL41O60662 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL41O60662 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL41O60662 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL41O60662 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL41O60662 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL41O60662 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
KLHL41O60662 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL41O60662 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.14■□□□□ 0.33
KLHL41O60662 VENTXP7-201ENST00000475503 772 ntBASIC17.14■□□□□ 0.33
KLHL41O60662 AP003733.1-201ENST00000491725 852 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms