Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.78■□□□□ 0.44
TSPAN3O60637 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.77■□□□□ 0.44
TSPAN3O60637 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TSPAN3O60637 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.77■□□□□ 0.44
TSPAN3O60637 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TSPAN3O60637 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.77■□□□□ 0.44
TSPAN3O60637 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TSPAN3O60637 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TSPAN3O60637 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TSPAN3O60637 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TSPAN3O60637 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TSPAN3O60637 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TSPAN3O60637 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TSPAN3O60637 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TSPAN3O60637 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TSPAN3O60637 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
TSPAN3O60637 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TSPAN3O60637 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.77■□□□□ 0.44
TSPAN3O60637 CRYGEP-201ENST00000412192 528 ntBASIC17.77■□□□□ 0.44
TSPAN3O60637 AL591424.1-201ENST00000442569 1213 ntBASIC17.77■□□□□ 0.44
TSPAN3O60637 RNA5SP416-201ENST00000516838 111 ntBASIC17.77■□□□□ 0.44
TSPAN3O60637 PGAM5P1-201ENST00000518923 814 ntBASIC17.77■□□□□ 0.44
TSPAN3O60637 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.77■□□□□ 0.44
TSPAN3O60637 AC092865.5-201ENST00000545435 363 ntBASIC17.77■□□□□ 0.44
TSPAN3O60637 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.77■□□□□ 0.44
TSPAN3O60637 AC064836.3-201ENST00000607928 673 ntBASIC17.77■□□□□ 0.44
TSPAN3O60637 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.77■□□□□ 0.44
TSPAN3O60637 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TSPAN3O60637 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TSPAN3O60637 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.77■□□□□ 0.43
TSPAN3O60637 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.77■□□□□ 0.43
TSPAN3O60637 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TSPAN3O60637 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
TSPAN3O60637 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
TSPAN3O60637 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.77■□□□□ 0.43
TSPAN3O60637 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TSPAN3O60637 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TSPAN3O60637 PCDHB18P-201ENST00000524813 2368 ntBASIC17.76■□□□□ 0.43
TSPAN3O60637 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TSPAN3O60637 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TSPAN3O60637 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.76■□□□□ 0.43
TSPAN3O60637 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
TSPAN3O60637 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TSPAN3O60637 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TSPAN3O60637 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TSPAN3O60637 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TSPAN3O60637 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.76■□□□□ 0.43
TSPAN3O60637 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TSPAN3O60637 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.76■□□□□ 0.43
TSPAN3O60637 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.76■□□□□ 0.43
TSPAN3O60637 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TSPAN3O60637 AC023274.1-201ENST00000418278 595 ntBASIC17.76■□□□□ 0.43
TSPAN3O60637 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TSPAN3O60637 KRT18P2-201ENST00000447938 1258 ntBASIC17.76■□□□□ 0.43
TSPAN3O60637 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.76■□□□□ 0.43
TSPAN3O60637 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.76■□□□□ 0.43
TSPAN3O60637 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.76■□□□□ 0.43
TSPAN3O60637 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.76■□□□□ 0.43
TSPAN3O60637 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.76■□□□□ 0.43
TSPAN3O60637 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TSPAN3O60637 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.76■□□□□ 0.43
TSPAN3O60637 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
TSPAN3O60637 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TSPAN3O60637 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.76■□□□□ 0.43
TSPAN3O60637 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TSPAN3O60637 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TSPAN3O60637 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.76■□□□□ 0.43
TSPAN3O60637 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TSPAN3O60637 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TSPAN3O60637 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TSPAN3O60637 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TSPAN3O60637 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TSPAN3O60637 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TSPAN3O60637 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TSPAN3O60637 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
TSPAN3O60637 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TSPAN3O60637 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TSPAN3O60637 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TSPAN3O60637 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TSPAN3O60637 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TSPAN3O60637 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TSPAN3O60637 AP002414.1-201ENST00000391405 1147 ntBASIC17.75■□□□□ 0.43
TSPAN3O60637 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.75■□□□□ 0.43
TSPAN3O60637 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TSPAN3O60637 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.75■□□□□ 0.43
TSPAN3O60637 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.75■□□□□ 0.43
TSPAN3O60637 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.75■□□□□ 0.43
TSPAN3O60637 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.75■□□□□ 0.43
TSPAN3O60637 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TSPAN3O60637 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TSPAN3O60637 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TSPAN3O60637 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TSPAN3O60637 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
TSPAN3O60637 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.75■□□□□ 0.43
TSPAN3O60637 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.75■□□□□ 0.43
TSPAN3O60637 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.75■□□□□ 0.43
TSPAN3O60637 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TSPAN3O60637 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TSPAN3O60637 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TSPAN3O60637 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms