Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN3O00409 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
FOXN3O00409 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXN3O00409 ACTG1P4-201ENST00000425123 1122 ntBASIC18.46■□□□□ 0.55
FOXN3O00409 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
FOXN3O00409 AC106795.1-205ENST00000512851 1056 ntBASIC18.46■□□□□ 0.55
FOXN3O00409 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.46■□□□□ 0.55
FOXN3O00409 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXN3O00409 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.46■□□□□ 0.55
FOXN3O00409 RNF216P1-203ENST00000404404 2427 ntBASIC18.46■□□□□ 0.55
FOXN3O00409 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXN3O00409 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXN3O00409 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
FOXN3O00409 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXN3O00409 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN3O00409 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXN3O00409 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN3O00409 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN3O00409 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXN3O00409 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN3O00409 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN3O00409 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN3O00409 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXN3O00409 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.45■□□□□ 0.54
FOXN3O00409 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
FOXN3O00409 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXN3O00409 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN3O00409 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN3O00409 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN3O00409 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXN3O00409 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXN3O00409 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXN3O00409 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.45■□□□□ 0.54
FOXN3O00409 KRT18P31-201ENST00000506277 1292 ntBASIC18.45■□□□□ 0.54
FOXN3O00409 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN3O00409 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.45■□□□□ 0.54
FOXN3O00409 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.45■□□□□ 0.54
FOXN3O00409 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.45■□□□□ 0.54
FOXN3O00409 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN3O00409 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN3O00409 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN3O00409 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN3O00409 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
FOXN3O00409 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN3O00409 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.45■□□□□ 0.54
FOXN3O00409 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN3O00409 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN3O00409 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN3O00409 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN3O00409 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN3O00409 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXN3O00409 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXN3O00409 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN3O00409 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.44■□□□□ 0.54
FOXN3O00409 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN3O00409 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN3O00409 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN3O00409 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN3O00409 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.44■□□□□ 0.54
FOXN3O00409 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN3O00409 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
FOXN3O00409 TSPY19P-201ENST00000418461 509 ntBASIC18.44■□□□□ 0.54
FOXN3O00409 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.44■□□□□ 0.54
FOXN3O00409 TSPY18P-201ENST00000441642 509 ntBASIC18.44■□□□□ 0.54
FOXN3O00409 PRYP5-201ENST00000451909 266 ntBASIC18.44■□□□□ 0.54
FOXN3O00409 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.44■□□□□ 0.54
FOXN3O00409 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXN3O00409 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.44■□□□□ 0.54
FOXN3O00409 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN3O00409 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.44■□□□□ 0.54
FOXN3O00409 NKAPP1-205ENST00000585790 367 ntBASIC18.44■□□□□ 0.54
FOXN3O00409 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXN3O00409 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXN3O00409 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
FOXN3O00409 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXN3O00409 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXN3O00409 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN3O00409 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN3O00409 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN3O00409 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN3O00409 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN3O00409 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.44■□□□□ 0.54
FOXN3O00409 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN3O00409 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
FOXN3O00409 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN3O00409 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXN3O00409 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
FOXN3O00409 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN3O00409 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
FOXN3O00409 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN3O00409 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
FOXN3O00409 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN3O00409 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN3O00409 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
FOXN3O00409 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN3O00409 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN3O00409 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN3O00409 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN3O00409 LINC00982-205ENST00000420957 435 ntBASIC18.43■□□□□ 0.54
FOXN3O00409 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms