Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
O00370 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
O00370 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
O00370 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
O00370 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
O00370 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
O00370 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.4■□□□□ 0.54
O00370 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
O00370 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.4■□□□□ 0.54
O00370 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.4■□□□□ 0.54
O00370 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.4■□□□□ 0.54
O00370 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
O00370 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
O00370 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.4■□□□□ 0.54
O00370 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.4■□□□□ 0.54
O00370 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.4■□□□□ 0.54
O00370 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.4■□□□□ 0.54
O00370 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.4■□□□□ 0.54
O00370 AC021087.4-201ENST00000563761 564 ntBASIC18.4■□□□□ 0.54
O00370 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
O00370 AC104692.2-201ENST00000603054 253 ntBASIC18.4■□□□□ 0.54
O00370 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
O00370 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
O00370 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
O00370 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.4■□□□□ 0.54
O00370 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.4■□□□□ 0.54
O00370 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.4■□□□□ 0.54
O00370 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
O00370 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
O00370 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
O00370 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
O00370 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
O00370 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
O00370 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.39■□□□□ 0.53
O00370 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
O00370 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
O00370 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.39■□□□□ 0.53
O00370 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
O00370 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
O00370 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
O00370 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
O00370 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
O00370 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.39■□□□□ 0.53
O00370 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
O00370 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
O00370 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
O00370 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.39■□□□□ 0.53
O00370 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
O00370 MTDHP4-201ENST00000600287 670 ntBASIC18.39■□□□□ 0.53
O00370 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.39■□□□□ 0.53
O00370 AC025062.2-201ENST00000605477 670 ntBASIC18.39■□□□□ 0.53
O00370 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.39■□□□□ 0.53
O00370 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.39■□□□□ 0.53
O00370 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
O00370 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
O00370 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.39■□□□□ 0.53
O00370 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
O00370 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.39■□□□□ 0.53
O00370 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
O00370 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.39■□□□□ 0.53
O00370 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
O00370 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
O00370 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
O00370 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
O00370 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
O00370 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.39■□□□□ 0.53
O00370 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
O00370 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.38■□□□□ 0.53
O00370 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
O00370 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
O00370 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
O00370 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.38■□□□□ 0.53
O00370 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.38■□□□□ 0.53
O00370 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
O00370 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
O00370 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
O00370 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
O00370 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
O00370 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.38■□□□□ 0.53
O00370 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.38■□□□□ 0.53
O00370 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
O00370 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.38■□□□□ 0.53
O00370 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.38■□□□□ 0.53
O00370 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
O00370 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.38■□□□□ 0.53
O00370 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
O00370 AC097637.2-201ENST00000624096 1997 ntBASIC18.38■□□□□ 0.53
O00370 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.38■□□□□ 0.53
O00370 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
O00370 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
O00370 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
O00370 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
O00370 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
O00370 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
O00370 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
O00370 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
O00370 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
O00370 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
O00370 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
O00370 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms