Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
AP3B1O00203 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
AP3B1O00203 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.44■□□□□ 0.38
AP3B1O00203 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.44■□□□□ 0.38
AP3B1O00203 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.44■□□□□ 0.38
AP3B1O00203 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.44■□□□□ 0.38
AP3B1O00203 MIR3180-1-201ENST00000580374 94 ntBASIC17.44■□□□□ 0.38
AP3B1O00203 MIR3180-3-201ENST00000584616 94 ntBASIC17.44■□□□□ 0.38
AP3B1O00203 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.44■□□□□ 0.38
AP3B1O00203 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
AP3B1O00203 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.44■□□□□ 0.38
AP3B1O00203 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.44■□□□□ 0.38
AP3B1O00203 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
AP3B1O00203 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
AP3B1O00203 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.44■□□□□ 0.38
AP3B1O00203 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.44■□□□□ 0.38
AP3B1O00203 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3B1O00203 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
AP3B1O00203 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3B1O00203 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
AP3B1O00203 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
AP3B1O00203 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3B1O00203 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3B1O00203 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP3B1O00203 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
AP3B1O00203 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.43■□□□□ 0.38
AP3B1O00203 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3B1O00203 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP3B1O00203 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3B1O00203 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.43■□□□□ 0.38
AP3B1O00203 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
AP3B1O00203 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.43■□□□□ 0.38
AP3B1O00203 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.43■□□□□ 0.38
AP3B1O00203 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
AP3B1O00203 AP000867.3-201ENST00000524675 377 ntBASIC17.43■□□□□ 0.38
AP3B1O00203 NPAP1P7-201ENST00000613027 823 ntBASIC17.43■□□□□ 0.38
AP3B1O00203 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.43■□□□□ 0.38
AP3B1O00203 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.43■□□□□ 0.38
AP3B1O00203 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.43■□□□□ 0.38
AP3B1O00203 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
AP3B1O00203 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.43■□□□□ 0.38
AP3B1O00203 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.43■□□□□ 0.38
AP3B1O00203 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP3B1O00203 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.43■□□□□ 0.38
AP3B1O00203 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3B1O00203 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.43■□□□□ 0.38
AP3B1O00203 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.43■□□□□ 0.38
AP3B1O00203 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP3B1O00203 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
AP3B1O00203 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.43■□□□□ 0.38
AP3B1O00203 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.43■□□□□ 0.38
AP3B1O00203 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3B1O00203 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3B1O00203 AC105020.1-201ENST00000435356 2205 ntBASIC17.43■□□□□ 0.38
AP3B1O00203 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3B1O00203 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3B1O00203 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP3B1O00203 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.42■□□□□ 0.38
AP3B1O00203 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.42■□□□□ 0.38
AP3B1O00203 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
AP3B1O00203 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3B1O00203 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP3B1O00203 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3B1O00203 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP3B1O00203 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP3B1O00203 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP3B1O00203 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.42■□□□□ 0.38
AP3B1O00203 SPDYE21P-201ENST00000413323 827 ntBASIC17.42■□□□□ 0.38
AP3B1O00203 ABCD1P5-201ENST00000445663 754 ntBASIC17.42■□□□□ 0.38
AP3B1O00203 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.42■□□□□ 0.38
AP3B1O00203 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.42■□□□□ 0.38
AP3B1O00203 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.42■□□□□ 0.38
AP3B1O00203 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3B1O00203 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3B1O00203 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.42■□□□□ 0.38
AP3B1O00203 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP3B1O00203 TUBB8P12-201ENST00000308911 1335 ntBASIC17.42■□□□□ 0.38
AP3B1O00203 TUBB7P-202ENST00000428444 1305 ntBASIC17.42■□□□□ 0.38
AP3B1O00203 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP3B1O00203 TUBB8P7-204ENST00000567960 1332 ntBASIC17.42■□□□□ 0.38
AP3B1O00203 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3B1O00203 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms