Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
VGLL3A8MV65 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.94■□□□□ 0.3
VGLL3A8MV65 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VGLL3A8MV65 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.94■□□□□ 0.3
VGLL3A8MV65 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VGLL3A8MV65 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.94■□□□□ 0.3
VGLL3A8MV65 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.94■□□□□ 0.3
VGLL3A8MV65 AC026185.1-201ENST00000445748 174 ntBASIC16.94■□□□□ 0.3
VGLL3A8MV65 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
VGLL3A8MV65 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.94■□□□□ 0.3
VGLL3A8MV65 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.94■□□□□ 0.3
VGLL3A8MV65 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.94■□□□□ 0.3
VGLL3A8MV65 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.94■□□□□ 0.3
VGLL3A8MV65 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC16.94■□□□□ 0.3
VGLL3A8MV65 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.94■□□□□ 0.3
VGLL3A8MV65 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VGLL3A8MV65 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.94■□□□□ 0.3
VGLL3A8MV65 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.93■□□□□ 0.3
VGLL3A8MV65 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.93■□□□□ 0.3
VGLL3A8MV65 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
VGLL3A8MV65 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
VGLL3A8MV65 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.93■□□□□ 0.3
VGLL3A8MV65 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
VGLL3A8MV65 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.93■□□□□ 0.3
VGLL3A8MV65 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
VGLL3A8MV65 AC231657.2-201ENST00000624556 255 ntBASIC16.93■□□□□ 0.3
VGLL3A8MV65 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.93■□□□□ 0.3
VGLL3A8MV65 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VGLL3A8MV65 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
VGLL3A8MV65 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
VGLL3A8MV65 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VGLL3A8MV65 AC007292.2-201ENST00000593524 1812 ntBASIC16.93■□□□□ 0.3
VGLL3A8MV65 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 AL138688.1-201ENST00000624851 1594 ntBASIC16.93■□□□□ 0.3
VGLL3A8MV65 FLJ16779-201ENST00000612722 7638 ntBASIC16.93■□□□□ 0.3
VGLL3A8MV65 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
VGLL3A8MV65 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VGLL3A8MV65 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms