Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 COX5BP2-201ENST00000392354 334 ntBASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 AL359075.1-203ENST00000462729 1002 ntBASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 AC011558.1-201ENST00000623459 338 ntBASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 AC092053.1-201ENST00000605787 1936 ntBASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GOLGA6L4A6NEF3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 AC010203.1-204ENST00000548782 407 ntBASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 AC097374.2-201ENST00000618617 1306 ntBASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GOLGA6L4A6NEF3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 MIR662-201ENST00000384847 95 ntBASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GOLGA6L4A6NEF3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GOLGA6L4A6NEF3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GOLGA6L4A6NEF3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
GOLGA6L4A6NEF3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GOLGA6L4A6NEF3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
GOLGA6L4A6NEF3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GOLGA6L4A6NEF3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
GOLGA6L4A6NEF3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
GOLGA6L4A6NEF3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GOLGA6L4A6NEF3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
GOLGA6L4A6NEF3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
GOLGA6L4A6NEF3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.93■□□□□ 0.78
GOLGA6L4A6NEF3 AC010460.3-201ENST00000511359 1579 ntBASIC19.93■□□□□ 0.78
GOLGA6L4A6NEF3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms