Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 HYMAI-201ENST00000635591 3347 ntBASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 RPS2P55-201ENST00000397318 883 ntBASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 HLA-L-209ENST00000420110 1011 ntBASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 AC004263.2-201ENST00000617183 678 ntBASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRDV1A0A1B0GX56 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 AC107956.1-201ENST00000494359 873 ntBASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 AC026471.5-201ENST00000615068 467 ntBASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 AL391256.1-201ENST00000443260 1855 ntBASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRDV1A0A1B0GX56 FRMD8P1-201ENST00000440433 1524 ntBASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 UNC93B2-201ENST00000285383 730 ntBASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 IGHV3-52-201ENST00000519770 353 ntBASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms