Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC196A0A1B0GTZ2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 FAM197Y8-203ENST00000450145 560 ntBASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 RNPS1P1-201ENST00000507437 918 ntBASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 AC107918.4-202ENST00000641623 219 ntBASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC196A0A1B0GTZ2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 TPM4P1-201ENST00000436100 807 ntBASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 AF186996.4-201ENST00000467186 377 ntBASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 AC006557.2-201ENST00000592985 1240 ntBASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 AC004706.3-202ENST00000621574 984 ntBASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC196A0A1B0GTZ2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 AL590787.1-201ENST00000568856 1315 ntBASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 TP73-AS1-207ENST00000624167 988 ntBASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms