Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RHBDD3Q9Y3P4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.16■□□□□ 0.02
RHBDD3Q9Y3P4 AL121672.3-201ENST00000608644 468 ntBASIC15.16■□□□□ 0.02
RHBDD3Q9Y3P4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RHBDD3Q9Y3P4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RHBDD3Q9Y3P4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RHBDD3Q9Y3P4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RHBDD3Q9Y3P4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.16■□□□□ 0.02
RHBDD3Q9Y3P4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RHBDD3Q9Y3P4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.16■□□□□ 0.02
RHBDD3Q9Y3P4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RHBDD3Q9Y3P4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RHBDD3Q9Y3P4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
RHBDD3Q9Y3P4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RHBDD3Q9Y3P4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 AC016734.2-201ENST00000624325 1377 ntBASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 COX5BP2-201ENST00000392354 334 ntBASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 PCED1CP-201ENST00000419887 785 ntBASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 AL353801.3-201ENST00000609898 542 ntBASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RHBDD3Q9Y3P4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 CHCHD2P8-201ENST00000429873 447 ntBASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 AC007967.3-201ENST00000434308 558 ntBASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 AC116407.4-201ENST00000623319 1061 ntBASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RHBDD3Q9Y3P4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms