Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 KLF4P1-201ENST00000412782 1185 ntBASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 AC073648.2-201ENST00000510116 352 ntBASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 STK19B-204ENST00000512515 211 ntBASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 AL391005.1-201ENST00000623953 2435 ntBASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPH3AQ9Y2J0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 LINC00304-203ENST00000565008 1864 ntBASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 MIR574-201ENST00000385209 96 ntBASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 AC002558.1-201ENST00000488906 803 ntBASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 TNRC18P3-201ENST00000441896 2691 ntBASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RPH3AQ9Y2J0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 HLA-J-201ENST00000462773 1622 ntBASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 AC079776.2-201ENST00000641154 1609 ntBASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 AL590627.1-203ENST00000421194 1026 ntBASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 AL020989.1-201ENST00000422979 469 ntBASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 AF186996.4-201ENST00000467186 377 ntBASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
RPH3AQ9Y2J0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms