Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 AC009065.1-201ENST00000564055 1225 ntBASIC16.31■□□□□ 0.2
RNF6Q9Y252 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.31■□□□□ 0.2
RNF6Q9Y252 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
RNF6Q9Y252 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF6Q9Y252 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 IGHV3-47-201ENST00000425060 335 ntBASIC16.3■□□□□ 0.2
RNF6Q9Y252 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 AP002469.2-201ENST00000531724 424 ntBASIC16.3■□□□□ 0.2
RNF6Q9Y252 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 AL353801.3-201ENST00000609898 542 ntBASIC16.3■□□□□ 0.2
RNF6Q9Y252 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF6Q9Y252 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF6Q9Y252 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF6Q9Y252 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF6Q9Y252 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms