Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 NPAP1P7-201ENST00000613027 823 ntBASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00474Q9P2X8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 KRT8P47-201ENST00000604727 1398 ntBASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 AC007326.2-201ENST00000624224 7579 ntBASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 AC009949.1-201ENST00000623048 1830 ntBASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 AC068587.6-202ENST00000641839 5619 ntBASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 NUS1P1-201ENST00000446295 882 ntBASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 AL121772.3-201ENST00000610840 674 ntBASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms