Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD7Q9P2D1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 AC004840.1-201ENST00000636359 365 ntBASIC18.05■□□□□ 0.48
CHD7Q9P2D1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 SNX29P1-201ENST00000548357 1007 ntBASIC18.05■□□□□ 0.48
CHD7Q9P2D1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD7Q9P2D1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 AC016027.1-202ENST00000607927 1699 ntBASIC18.04■□□□□ 0.48
CHD7Q9P2D1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 MYCLP1-201ENST00000372451 1075 ntBASIC18.04■□□□□ 0.48
CHD7Q9P2D1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHD7Q9P2D1 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 MIR3909-201ENST00000579518 119 ntBASIC18.03■□□□□ 0.48
CHD7Q9P2D1 AC007967.4-201ENST00000614700 386 ntBASIC18.03■□□□□ 0.48
CHD7Q9P2D1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 SLC22A20-204ENST00000530038 1673 ntBASIC18.03■□□□□ 0.48
CHD7Q9P2D1 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms