Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 AC105233.6-201ENST00000642093 218 ntBASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT13Q9NUP7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 AC009113.1-201ENST00000570267 2443 ntBASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 MIR661-201ENST00000384842 89 ntBASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 AC015922.1-201ENST00000421102 1152 ntBASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 UGT1A2P-201ENST00000454886 866 ntBASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 LINC01451-201ENST00000623792 534 ntBASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
TRMT13Q9NUP7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 AC107890.1-201ENST00000422478 521 ntBASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 AC002472.2-201ENST00000442739 958 ntBASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 AC125807.1-201ENST00000483097 614 ntBASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 LINC01225-203ENST00000563550 1244 ntBASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 BX323043.1-201ENST00000641006 1765 ntBASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 FO538757.1-201ENST00000623083 1397 ntBASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRMT13Q9NUP7 UXT-AS1-201ENST00000590504 1525 ntBASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 LYSMD4-203ENST00000378904 2122 ntBASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 IGHV3-62-201ENST00000520057 340 ntBASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 AC026150.2-201ENST00000564693 1156 ntBASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 RN7SL204P-201ENST00000582831 262 ntBASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 AL161645.1-201ENST00000622716 1255 ntBASIC18.79■□□□□ 0.6
TRMT13Q9NUP7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms