Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN4Q9NQP4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN4Q9NQP4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN4Q9NQP4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PFDN4Q9NQP4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN4Q9NQP4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PFDN4Q9NQP4 AC103702.1-201ENST00000548801 2630 ntBASIC17.07■□□□□ 0.32
PFDN4Q9NQP4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.07■□□□□ 0.32
PFDN4Q9NQP4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN4Q9NQP4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN4Q9NQP4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PFDN4Q9NQP4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN4Q9NQP4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN4Q9NQP4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN4Q9NQP4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN4Q9NQP4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN4Q9NQP4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN4Q9NQP4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 MIR600HG-201ENST00000449175 5984 ntBASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 LYSMD4-203ENST00000378904 2122 ntBASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 NKILA-202ENST00000614771 2598 ntBASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 RN7SL850P-201ENST00000579959 291 ntBASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 AC006011.2-201ENST00000621313 1158 ntBASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 AC022211.2-201ENST00000585075 2527 ntBASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN4Q9NQP4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 AC002558.1-201ENST00000488906 803 ntBASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 ZNF444P1-201ENST00000559497 298 ntBASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 AL139327.4-201ENST00000612362 153 ntBASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 AC079602.3-201ENST00000623931 403 ntBASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN4Q9NQP4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms