Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.5■□□□□ 0.39
POLR1EQ9GZS1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
POLR1EQ9GZS1 AL353135.1-201ENST00000606729 504 ntBASIC17.5■□□□□ 0.39
POLR1EQ9GZS1 AL139424.1-201ENST00000607572 797 ntBASIC17.5■□□□□ 0.39
POLR1EQ9GZS1 AC107918.4-202ENST00000641623 219 ntBASIC17.5■□□□□ 0.39
POLR1EQ9GZS1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1EQ9GZS1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
POLR1EQ9GZS1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.5■□□□□ 0.39
POLR1EQ9GZS1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1EQ9GZS1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1EQ9GZS1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1EQ9GZS1 AC106820.2-201ENST00000563775 3264 ntBASIC17.5■□□□□ 0.39
POLR1EQ9GZS1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1EQ9GZS1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 AL160237.2-201ENST00000556165 472 ntBASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 AC104692.2-201ENST00000603054 253 ntBASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 AP001094.4-201ENST00000579008 2176 ntBASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR1EQ9GZS1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 RPS2P1-201ENST00000434010 821 ntBASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 AC018712.1-201ENST00000455767 687 ntBASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 OR7E14P-202ENST00000530490 1290 ntBASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 AP002469.2-201ENST00000531724 424 ntBASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 AC006557.2-201ENST00000592985 1240 ntBASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 AC004706.3-202ENST00000621574 984 ntBASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 GPR89P-201ENST00000407924 1495 ntBASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR1EQ9GZS1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1EQ9GZS1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1EQ9GZS1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1EQ9GZS1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
POLR1EQ9GZS1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
POLR1EQ9GZS1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.47■□□□□ 0.39
POLR1EQ9GZS1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR1EQ9GZS1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
POLR1EQ9GZS1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms