Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 FAM197Y8-203ENST00000450145 560 ntBASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 AC064862.7-201ENST00000604520 867 ntBASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 AP001269.4-201ENST00000609611 512 ntBASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 RBM17P3-201ENST00000417687 1192 ntBASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 SCARNA2-201ENST00000458748 420 ntBASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 AL662844.1-201ENST00000546340 181 ntBASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 AC097374.2-201ENST00000618617 1306 ntBASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 AC010460.3-201ENST00000511359 1579 ntBASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 AC100803.2-201ENST00000562459 1963 ntBASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCGF1Q9BSM1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 MRPL3P1-201ENST00000400109 1033 ntBASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 ABCD1P5-201ENST00000445663 754 ntBASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 AF186996.4-201ENST00000467186 377 ntBASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms