Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.89■□□□□ 0.45
CDK5RAP1Q96SZ6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 AC007967.2-201ENST00000432613 625 ntBASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 HCG4B-203ENST00000450128 991 ntBASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.88■□□□□ 0.45
CDK5RAP1Q96SZ6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 EGFEM1P-202ENST00000431685 1563 ntBASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 PGAM5P1-201ENST00000518923 814 ntBASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP1Q96SZ6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 AC023511.2-201ENST00000618803 211 ntBASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CDK5RAP1Q96SZ6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms