Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.48■□□□□ 0.23
ITCHQ96J02 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ITCHQ96J02 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ITCHQ96J02 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ITCHQ96J02 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.48■□□□□ 0.23
ITCHQ96J02 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
ITCHQ96J02 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ITCHQ96J02 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ITCHQ96J02 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 AC092647.4-201ENST00000457211 535 ntBASIC16.48■□□□□ 0.23
ITCHQ96J02 AC122714.2-201ENST00000502787 707 ntBASIC16.48■□□□□ 0.23
ITCHQ96J02 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.48■□□□□ 0.23
ITCHQ96J02 AC124947.2-201ENST00000547118 1133 ntBASIC16.48■□□□□ 0.23
ITCHQ96J02 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 AC111152.3-201ENST00000569699 673 ntBASIC16.48■□□□□ 0.23
ITCHQ96J02 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.48■□□□□ 0.23
ITCHQ96J02 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.48■□□□□ 0.23
ITCHQ96J02 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.48■□□□□ 0.23
ITCHQ96J02 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.48■□□□□ 0.23
ITCHQ96J02 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
ITCHQ96J02 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.48■□□□□ 0.23
ITCHQ96J02 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.48■□□□□ 0.23
ITCHQ96J02 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ITCHQ96J02 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.48■□□□□ 0.23
ITCHQ96J02 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.48■□□□□ 0.23
ITCHQ96J02 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ITCHQ96J02 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ITCHQ96J02 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.48■□□□□ 0.23
ITCHQ96J02 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.48■□□□□ 0.23
ITCHQ96J02 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ITCHQ96J02 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ITCHQ96J02 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.47■□□□□ 0.23
ITCHQ96J02 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
ITCHQ96J02 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ITCHQ96J02 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
ITCHQ96J02 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.47■□□□□ 0.23
ITCHQ96J02 AC005521.1-201ENST00000393351 872 ntBASIC16.47■□□□□ 0.23
ITCHQ96J02 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ITCHQ96J02 AC103564.2-201ENST00000432853 1299 ntBASIC16.47■□□□□ 0.23
ITCHQ96J02 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.47■□□□□ 0.23
ITCHQ96J02 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.47■□□□□ 0.23
ITCHQ96J02 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.47■□□□□ 0.23
ITCHQ96J02 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.47■□□□□ 0.23
ITCHQ96J02 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.47■□□□□ 0.23
ITCHQ96J02 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
ITCHQ96J02 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.47■□□□□ 0.23
ITCHQ96J02 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.47■□□□□ 0.23
ITCHQ96J02 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ITCHQ96J02 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.47■□□□□ 0.23
ITCHQ96J02 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ITCHQ96J02 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
ITCHQ96J02 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ITCHQ96J02 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ITCHQ96J02 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ITCHQ96J02 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ITCHQ96J02 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ITCHQ96J02 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ITCHQ96J02 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ITCHQ96J02 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ITCHQ96J02 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ITCHQ96J02 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.46■□□□□ 0.23
ITCHQ96J02 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms