Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.69■□□□□ 0.58
PGBD4Q96DM1 AP006288.1-201ENST00000446065 395 ntBASIC18.69■□□□□ 0.58
PGBD4Q96DM1 CXCL1P1-201ENST00000502804 216 ntBASIC18.69■□□□□ 0.58
PGBD4Q96DM1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
PGBD4Q96DM1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.69■□□□□ 0.58
PGBD4Q96DM1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.69■□□□□ 0.58
PGBD4Q96DM1 AC023141.13-201ENST00000604991 943 ntBASIC18.69■□□□□ 0.58
PGBD4Q96DM1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.69■□□□□ 0.58
PGBD4Q96DM1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.69■□□□□ 0.58
PGBD4Q96DM1 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.69■□□□□ 0.58
PGBD4Q96DM1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.69■□□□□ 0.58
PGBD4Q96DM1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD4Q96DM1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PGBD4Q96DM1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.69■□□□□ 0.58
PGBD4Q96DM1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 HTR5BP-201ENST00000430851 1154 ntBASIC18.68■□□□□ 0.58
PGBD4Q96DM1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 DNAJB3-202ENST00000449667 1266 ntBASIC18.68■□□□□ 0.58
PGBD4Q96DM1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 KRT19P2-202ENST00000557173 1012 ntBASIC18.68■□□□□ 0.58
PGBD4Q96DM1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 MIR4469-201ENST00000583919 79 ntBASIC18.68■□□□□ 0.58
PGBD4Q96DM1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PGBD4Q96DM1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 LINC00304-203ENST00000565008 1864 ntBASIC18.67■□□□□ 0.58
PGBD4Q96DM1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 ALG1L5P-201ENST00000482043 771 ntBASIC18.67■□□□□ 0.58
PGBD4Q96DM1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 AC068880.1-201ENST00000507289 2297 ntBASIC18.67■□□□□ 0.58
PGBD4Q96DM1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.67■□□□□ 0.58
PGBD4Q96DM1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 AC025580.3-201ENST00000617932 1424 ntBASIC18.66■□□□□ 0.58
PGBD4Q96DM1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 PAWRP1-201ENST00000451083 565 ntBASIC18.66■□□□□ 0.58
PGBD4Q96DM1 AC074386.1-202ENST00000463561 864 ntBASIC18.66■□□□□ 0.58
PGBD4Q96DM1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 AC006116.8-202ENST00000587620 1550 ntBASIC18.66■□□□□ 0.58
PGBD4Q96DM1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD4Q96DM1 PCDHB18P-201ENST00000524813 2368 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms