Protein–RNA interactions for Protein: Q92743

HTRA1, Serine protease HTRA1, humanhuman

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1Q92743 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.04■□□□□ 0.16
HTRA1Q92743 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HTRA1Q92743 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.04■□□□□ 0.16
HTRA1Q92743 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HTRA1Q92743 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.04■□□□□ 0.16
HTRA1Q92743 KRT18P56-201ENST00000507275 550 ntBASIC16.04■□□□□ 0.16
HTRA1Q92743 VENTXP5-201ENST00000523979 775 ntBASIC16.04■□□□□ 0.16
HTRA1Q92743 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.04■□□□□ 0.16
HTRA1Q92743 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.04■□□□□ 0.16
HTRA1Q92743 MIR3180-4-201ENST00000582223 153 ntBASIC16.04■□□□□ 0.16
HTRA1Q92743 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.04■□□□□ 0.16
HTRA1Q92743 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.04■□□□□ 0.16
HTRA1Q92743 AL121956.5-201ENST00000625261 221 ntBASIC16.04■□□□□ 0.16
HTRA1Q92743 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTRA1Q92743 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTRA1Q92743 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.04■□□□□ 0.16
HTRA1Q92743 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTRA1Q92743 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTRA1Q92743 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HTRA1Q92743 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTRA1Q92743 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HTRA1Q92743 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HTRA1Q92743 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.04■□□□□ 0.16
HTRA1Q92743 PCDHB17P-201ENST00000539533 2393 ntBASIC16.04■□□□□ 0.16
HTRA1Q92743 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTRA1Q92743 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.03■□□□□ 0.16
HTRA1Q92743 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HTRA1Q92743 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.03■□□□□ 0.16
HTRA1Q92743 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HTRA1Q92743 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.03■□□□□ 0.16
HTRA1Q92743 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HTRA1Q92743 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.03■□□□□ 0.16
HTRA1Q92743 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
HTRA1Q92743 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.03■□□□□ 0.16
HTRA1Q92743 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.03■□□□□ 0.16
HTRA1Q92743 AC034232.1-201ENST00000506026 1064 ntBASIC16.03■□□□□ 0.16
HTRA1Q92743 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.03■□□□□ 0.16
HTRA1Q92743 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.03■□□□□ 0.16
HTRA1Q92743 AC009065.1-201ENST00000564055 1225 ntBASIC16.03■□□□□ 0.16
HTRA1Q92743 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HTRA1Q92743 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HTRA1Q92743 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.03■□□□□ 0.16
HTRA1Q92743 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HTRA1Q92743 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HTRA1Q92743 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTRA1Q92743 AL391807.1-203ENST00000604392 2365 ntBASIC16.02■□□□□ 0.16
HTRA1Q92743 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTRA1Q92743 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTRA1Q92743 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HTRA1Q92743 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.02■□□□□ 0.16
HTRA1Q92743 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HTRA1Q92743 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HTRA1Q92743 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.02■□□□□ 0.16
HTRA1Q92743 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTRA1Q92743 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HTRA1Q92743 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTRA1Q92743 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTRA1Q92743 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTRA1Q92743 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTRA1Q92743 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTRA1Q92743 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.02■□□□□ 0.16
HTRA1Q92743 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.02■□□□□ 0.16
HTRA1Q92743 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.02■□□□□ 0.16
HTRA1Q92743 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
HTRA1Q92743 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.02■□□□□ 0.16
HTRA1Q92743 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HTRA1Q92743 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.02■□□□□ 0.16
HTRA1Q92743 PVRIG2P-201ENST00000435460 978 ntBASIC16.02■□□□□ 0.16
HTRA1Q92743 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HTRA1Q92743 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.02■□□□□ 0.16
HTRA1Q92743 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HTRA1Q92743 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HTRA1Q92743 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
HTRA1Q92743 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.02■□□□□ 0.16
HTRA1Q92743 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.02■□□□□ 0.16
HTRA1Q92743 AL136038.4-201ENST00000603606 1261 ntBASIC16.02■□□□□ 0.16
HTRA1Q92743 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.02■□□□□ 0.15
HTRA1Q92743 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
HTRA1Q92743 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms