Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40AQ8WXH6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 CICP6-201ENST00000457191 2729 ntBASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 LYSMD4-203ENST00000378904 2122 ntBASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 AC011498.5-201ENST00000592027 486 ntBASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40AQ8WXH6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB40AQ8WXH6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
RAB40AQ8WXH6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.21■□□□□ 0.02
RAB40AQ8WXH6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB40AQ8WXH6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RAB40AQ8WXH6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms