Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RTN4IP1Q8WWV3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RTN4IP1Q8WWV3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 AC005915.1-201ENST00000624912 2018 ntBASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 AL645929.1-201ENST00000420084 975 ntBASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 TSPY12P-201ENST00000421279 868 ntBASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 AC009154.2-201ENST00000621177 724 ntBASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 AL353692.3-201ENST00000407031 1396 ntBASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RTN4IP1Q8WWV3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 AC005332.3-201ENST00000589904 676 ntBASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 KRT8P47-201ENST00000604727 1398 ntBASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RTN4IP1Q8WWV3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 BX276092.7-203ENST00000637198 1536 ntBASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 PKD1P5-201ENST00000532415 10291 ntBASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 Z83836.1-201ENST00000624605 1642 ntBASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 AL603756.1-201ENST00000606511 2163 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms