Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SMIM11BQ8TCY0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC11.26□□□□□ -0.61
SMIM11BQ8TCY0 KRT16P1-201ENST00000399124 1418 ntBASIC11.26□□□□□ -0.61
SMIM11BQ8TCY0 LINC00167-201ENST00000530583 1419 ntBASIC11.26□□□□□ -0.61
SMIM11BQ8TCY0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 AC026185.1-201ENST00000445748 174 ntBASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 AC144831.1-201ENST00000573312 2656 ntBASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SMIM11BQ8TCY0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 AC239809.2-201ENST00000415381 517 ntBASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 CDCA4P2-201ENST00000441182 718 ntBASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC11.24□□□□□ -0.61
SMIM11BQ8TCY0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms