Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 GGTLC5P-201ENST00000617623 998 ntBASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.11■□□□□ 0.49
SHKBP1Q8TBC3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 HTR5BP-201ENST00000430851 1154 ntBASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 AC096734.2-201ENST00000562054 433 ntBASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 AC004877.2-201ENST00000623941 599 ntBASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHKBP1Q8TBC3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 ACTG1P4-201ENST00000425123 1122 ntBASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 AC027796.2-201ENST00000575326 344 ntBASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHKBP1Q8TBC3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHKBP1Q8TBC3 AL645608.8-201ENST00000606034 2086 ntBASIC18.08■□□□□ 0.49
SHKBP1Q8TBC3 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.08■□□□□ 0.49
SHKBP1Q8TBC3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SHKBP1Q8TBC3 REXO1L11P-201ENST00000620964 1927 ntBASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms