Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.45■□□□□ 0.54
LMO3Q8TAP4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 TP73-AS1-207ENST00000624167 988 ntBASIC18.44■□□□□ 0.54
LMO3Q8TAP4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMO3Q8TAP4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.44■□□□□ 0.54
LMO3Q8TAP4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 AC243591.1-201ENST00000452967 1364 ntBASIC18.43■□□□□ 0.54
LMO3Q8TAP4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 SCARNA2-201ENST00000458748 420 ntBASIC18.43■□□□□ 0.54
LMO3Q8TAP4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 AC139887.3-201ENST00000568585 713 ntBASIC18.43■□□□□ 0.54
LMO3Q8TAP4 LINC01711-201ENST00000598340 967 ntBASIC18.43■□□□□ 0.54
LMO3Q8TAP4 TERC-201ENST00000602385 541 ntBASIC18.43■□□□□ 0.54
LMO3Q8TAP4 AL691432.3-201ENST00000621860 400 ntBASIC18.43■□□□□ 0.54
LMO3Q8TAP4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LMO3Q8TAP4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 AL645728.1-201ENST00000366221 2101 ntBASIC18.42■□□□□ 0.54
LMO3Q8TAP4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LMO3Q8TAP4 PAWRP1-201ENST00000451083 565 ntBASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms