Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDH19Q8TAB3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH19Q8TAB3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
PCDH19Q8TAB3 AC092068.3-201ENST00000587894 2016 ntBASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH19Q8TAB3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 AC005915.1-201ENST00000624912 2018 ntBASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 AC097637.2-201ENST00000624096 1997 ntBASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 ACTG1P4-201ENST00000425123 1122 ntBASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 AC124947.2-201ENST00000547118 1133 ntBASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 AL031008.1-201ENST00000619963 541 ntBASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 AC105020.1-201ENST00000435356 2205 ntBASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH19Q8TAB3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 FDX1P1-201ENST00000449115 551 ntBASIC17.8■□□□□ 0.44
PCDH19Q8TAB3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms