Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BEST4Q8NFU0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST4Q8NFU0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST4Q8NFU0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST4Q8NFU0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST4Q8NFU0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.98□□□□□ -0.01
BEST4Q8NFU0 AC063926.3-201ENST00000624734 5658 ntBASIC14.98□□□□□ -0.01
BEST4Q8NFU0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
BEST4Q8NFU0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
BEST4Q8NFU0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.98□□□□□ -0.01
BEST4Q8NFU0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
BEST4Q8NFU0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST4Q8NFU0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST4Q8NFU0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
BEST4Q8NFU0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.98□□□□□ -0.01
BEST4Q8NFU0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
BEST4Q8NFU0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BEST4Q8NFU0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.98□□□□□ -0.01
BEST4Q8NFU0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
BEST4Q8NFU0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 AP002414.2-201ENST00000591780 3365 ntBASIC14.97□□□□□ -0.01
BEST4Q8NFU0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 MIR4651-201ENST00000582622 73 ntBASIC14.97□□□□□ -0.01
BEST4Q8NFU0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.97□□□□□ -0.01
BEST4Q8NFU0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BEST4Q8NFU0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 ABHD17AP1-201ENST00000358206 933 ntBASIC14.96□□□□□ -0.01
BEST4Q8NFU0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 KRT18P29-201ENST00000397031 1267 ntBASIC14.96□□□□□ -0.01
BEST4Q8NFU0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 DDX43P3-201ENST00000441064 443 ntBASIC14.96□□□□□ -0.01
BEST4Q8NFU0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.96□□□□□ -0.01
BEST4Q8NFU0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms