Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 AC093010.1-201ENST00000473625 1624 ntBASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
SPTSSBQ8NFR3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 SLC9A3P3-201ENST00000457608 2229 ntBASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 TP73-203ENST00000357733 4899 ntTSL 5 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 PTBP1P-201ENST00000554374 1601 ntBASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
SPTSSBQ8NFR3 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SPTSSBQ8NFR3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SPTSSBQ8NFR3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SPTSSBQ8NFR3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms