Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 SEC1P-202ENST00000473944 940 ntBASIC16.84■□□□□ 0.29
HIPK4Q8NE63 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 EGLN1P1-201ENST00000531623 762 ntBASIC16.84■□□□□ 0.29
HIPK4Q8NE63 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.84■□□□□ 0.29
HIPK4Q8NE63 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
HIPK4Q8NE63 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.83■□□□□ 0.29
HIPK4Q8NE63 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
HIPK4Q8NE63 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
HIPK4Q8NE63 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
HIPK4Q8NE63 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HIPK4Q8NE63 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
HIPK4Q8NE63 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 NORAD-201ENST00000565493 5339 ntBASIC16.83■□□□□ 0.28
HIPK4Q8NE63 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 AC116353.5-201ENST00000638148 1699 ntBASIC16.83■□□□□ 0.28
HIPK4Q8NE63 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HIPK4Q8NE63 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 KRT17P2-201ENST00000300992 1314 ntBASIC16.82■□□□□ 0.28
HIPK4Q8NE63 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 AC128688.1-201ENST00000487626 519 ntBASIC16.82■□□□□ 0.28
HIPK4Q8NE63 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HIPK4Q8NE63 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms