Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 AP005117.1-201ENST00000584346 1413 ntBASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 SIGLEC30P-201ENST00000455569 941 ntBASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 PRELID1P1-202ENST00000567272 903 ntBASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 AL121772.3-201ENST00000610840 674 ntBASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC116Q8IYX3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 SLC25A1P3-201ENST00000395415 828 ntBASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 KRT18P31-201ENST00000506277 1292 ntBASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 AC091304.2-201ENST00000564639 760 ntBASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 AP001269.4-201ENST00000609611 512 ntBASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC116Q8IYX3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 SPDYE21P-201ENST00000413323 827 ntBASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 TSPY19P-201ENST00000418461 509 ntBASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 TSPY18P-201ENST00000441642 509 ntBASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC116Q8IYX3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms