Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.2■□□□□ 0.34
APLFQ8IW19 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.2■□□□□ 0.34
APLFQ8IW19 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APLFQ8IW19 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.2■□□□□ 0.34
APLFQ8IW19 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.19■□□□□ 0.34
APLFQ8IW19 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APLFQ8IW19 AL603756.1-201ENST00000606511 2163 ntBASIC17.19■□□□□ 0.34
APLFQ8IW19 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
APLFQ8IW19 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.19■□□□□ 0.34
APLFQ8IW19 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
APLFQ8IW19 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
APLFQ8IW19 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APLFQ8IW19 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
APLFQ8IW19 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
APLFQ8IW19 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APLFQ8IW19 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APLFQ8IW19 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
APLFQ8IW19 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.19■□□□□ 0.34
APLFQ8IW19 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.19■□□□□ 0.34
APLFQ8IW19 AC106795.1-205ENST00000512851 1056 ntBASIC17.19■□□□□ 0.34
APLFQ8IW19 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
APLFQ8IW19 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.19■□□□□ 0.34
APLFQ8IW19 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
APLFQ8IW19 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.19■□□□□ 0.34
APLFQ8IW19 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.19■□□□□ 0.34
APLFQ8IW19 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
APLFQ8IW19 IGHV3-41-201ENST00000613121 348 ntBASIC17.19■□□□□ 0.34
APLFQ8IW19 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.19■□□□□ 0.34
APLFQ8IW19 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
APLFQ8IW19 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APLFQ8IW19 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
APLFQ8IW19 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
APLFQ8IW19 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.19■□□□□ 0.34
APLFQ8IW19 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
APLFQ8IW19 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APLFQ8IW19 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
APLFQ8IW19 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.19■□□□□ 0.34
APLFQ8IW19 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
APLFQ8IW19 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.19■□□□□ 0.34
APLFQ8IW19 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
APLFQ8IW19 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
APLFQ8IW19 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.19■□□□□ 0.34
APLFQ8IW19 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APLFQ8IW19 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.18■□□□□ 0.34
APLFQ8IW19 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 NFIC-211ENST00000641145 8399 ntBASIC17.18■□□□□ 0.34
APLFQ8IW19 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.18■□□□□ 0.34
APLFQ8IW19 LINC02199-201ENST00000506655 2702 ntBASIC17.18■□□□□ 0.34
APLFQ8IW19 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
APLFQ8IW19 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.18■□□□□ 0.34
APLFQ8IW19 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.18■□□□□ 0.34
APLFQ8IW19 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
APLFQ8IW19 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
APLFQ8IW19 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.18■□□□□ 0.34
APLFQ8IW19 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.18■□□□□ 0.34
APLFQ8IW19 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.18■□□□□ 0.34
APLFQ8IW19 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
APLFQ8IW19 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.18■□□□□ 0.34
APLFQ8IW19 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
APLFQ8IW19 AC068587.9-201ENST00000641814 219 ntBASIC17.18■□□□□ 0.34
APLFQ8IW19 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
APLFQ8IW19 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.18■□□□□ 0.34
APLFQ8IW19 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APLFQ8IW19 AC034236.2-201ENST00000606662 1610 ntBASIC17.18■□□□□ 0.34
APLFQ8IW19 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
APLFQ8IW19 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APLFQ8IW19 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APLFQ8IW19 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.17■□□□□ 0.34
APLFQ8IW19 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
APLFQ8IW19 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APLFQ8IW19 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APLFQ8IW19 MTMR9LP-203ENST00000426597 1545 ntBASIC17.17■□□□□ 0.34
APLFQ8IW19 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.17■□□□□ 0.34
APLFQ8IW19 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APLFQ8IW19 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
APLFQ8IW19 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.17■□□□□ 0.34
APLFQ8IW19 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APLFQ8IW19 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.17■□□□□ 0.34
APLFQ8IW19 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APLFQ8IW19 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms