Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 AC111152.3-201ENST00000569699 673 ntBASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 AC009336.1-201ENST00000608941 1553 ntBASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 ABCD1P5-201ENST00000445663 754 ntBASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 AC073592.5-201ENST00000624854 528 ntBASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 AC046185.3-201ENST00000623228 1824 ntBASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NHLRC1Q6VVB1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 AC073592.4-201ENST00000623827 446 ntBASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NHLRC1Q6VVB1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms