Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HIST2H2BCQ6DN03 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.64□□□□□ -0.07
HIST2H2BCQ6DN03 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.64□□□□□ -0.07
HIST2H2BCQ6DN03 AC093484.2-201ENST00000580996 2166 ntBASIC14.64□□□□□ -0.07
HIST2H2BCQ6DN03 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HIST2H2BCQ6DN03 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST2H2BCQ6DN03 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.64□□□□□ -0.07
HIST2H2BCQ6DN03 AP3S2-216ENST00000617003 1561 ntBASIC14.64□□□□□ -0.07
HIST2H2BCQ6DN03 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 AC020907.1-201ENST00000616460 1350 ntBASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 AC087499.6-201ENST00000411576 835 ntBASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 SPDYE18-201ENST00000510091 1050 ntBASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 AC073130.3-201ENST00000624389 2278 ntBASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 AC087499.5-201ENST00000452760 1342 ntBASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 AL023806.1-201ENST00000603994 1649 ntBASIC14.63□□□□□ -0.07
HIST2H2BCQ6DN03 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 RPL37AP1-201ENST00000412502 279 ntBASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H2BCQ6DN03 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 BRWD1P1-201ENST00000401091 371 ntBASIC14.61□□□□□ -0.07
HIST2H2BCQ6DN03 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms