Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 KRT18P67-201ENST00000432816 1264 ntBASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 OR7E14P-202ENST00000530490 1290 ntBASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRICKLE4Q2TBC4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 FRMD8P1-201ENST00000440433 1524 ntBASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 TPM4P1-201ENST00000436100 807 ntBASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 HNRNPDP1-201ENST00000439535 754 ntBASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 AF186996.4-201ENST00000467186 377 ntBASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 AP002469.2-201ENST00000531724 424 ntBASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 AL160237.2-201ENST00000556165 472 ntBASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRICKLE4Q2TBC4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 AC006557.2-201ENST00000592985 1240 ntBASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 AC148477.8-201ENST00000624298 468 ntBASIC16.03■□□□□ 0.16
PRICKLE4Q2TBC4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms