Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM71Q2Q1W2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM71Q2Q1W2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRIM71Q2Q1W2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM71Q2Q1W2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 AC004408.2-201ENST00000623613 2777 ntBASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 AP001059.3-201ENST00000619053 235 ntBASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRIM71Q2Q1W2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.71■□□□□ 0.58
TRIM71Q2Q1W2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 BICD1-207ENST00000551848 1962 ntBASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 KRT18P32-201ENST00000424695 1287 ntBASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 MIR4745-201ENST00000577608 62 ntBASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 AC005412.3-201ENST00000580309 715 ntBASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRIM71Q2Q1W2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 CNN2P2-201ENST00000443536 909 ntBASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 CNN2P3-201ENST00000450201 906 ntBASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 AC069262.1-201ENST00000539058 672 ntBASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 AC138761.1-201ENST00000584393 385 ntBASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 AL009183.1-201ENST00000603760 355 ntBASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 AL136317.3-201ENST00000618497 906 ntBASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 AIRN-201ENST00000601203 4374 ntBASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM71Q2Q1W2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM71Q2Q1W2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms