Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 REXO1L3P-201ENST00000622202 1288 ntBASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 LINC00628-201ENST00000628516 1289 ntBASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 AC020763.4-201ENST00000623414 4170 ntBASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTC1Q2NKJ3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 AL390955.2-201ENST00000603032 514 ntBASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 AF228730.6-201ENST00000641497 218 ntBASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 AC084121.3-201ENST00000641716 218 ntBASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 AC105233.6-201ENST00000642093 218 ntBASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTC1Q2NKJ3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 DDX43P3-201ENST00000441064 443 ntBASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 HLA-J-202ENST00000469281 1241 ntBASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 RNA5SP421-201ENST00000516864 134 ntBASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 AC135776.1-201ENST00000319817 2481 ntBASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 AL645608.8-201ENST00000606034 2086 ntBASIC18.42■□□□□ 0.54
CTC1Q2NKJ3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 AC106820.2-201ENST00000563775 3264 ntBASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 AC069262.1-201ENST00000539058 672 ntBASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 AC093520.2-201ENST00000561830 333 ntBASIC18.41■□□□□ 0.54
CTC1Q2NKJ3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms