Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL20P78556 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL20P78556 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL20P78556 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCL20P78556 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.63□□□□□ -0.23
CCL20P78556 CDCA4P2-201ENST00000441182 718 ntBASIC13.63□□□□□ -0.23
CCL20P78556 KSR1P1-201ENST00000446298 240 ntBASIC13.63□□□□□ -0.23
CCL20P78556 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CCL20P78556 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CCL20P78556 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.63□□□□□ -0.23
CCL20P78556 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CCL20P78556 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL20P78556 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.63□□□□□ -0.23
CCL20P78556 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL20P78556 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL20P78556 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL20P78556 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL20P78556 AC073347.1-201ENST00000421633 2643 ntBASIC13.63□□□□□ -0.23
CCL20P78556 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL20P78556 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CCL20P78556 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CCL20P78556 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CCL20P78556 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
CCL20P78556 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL20P78556 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCL20P78556 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.63□□□□□ -0.23
CCL20P78556 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL20P78556 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL20P78556 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL20P78556 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CCL20P78556 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL20P78556 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
CCL20P78556 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL20P78556 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
CCL20P78556 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL20P78556 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CCL20P78556 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL20P78556 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCL20P78556 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL20P78556 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CCL20P78556 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL20P78556 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.62□□□□□ -0.23
CCL20P78556 KRASP1-201ENST00000407852 552 ntBASIC13.62□□□□□ -0.23
CCL20P78556 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL20P78556 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.62□□□□□ -0.23
CCL20P78556 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.62□□□□□ -0.23
CCL20P78556 AC104390.1-201ENST00000555663 520 ntBASIC13.62□□□□□ -0.23
CCL20P78556 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL20P78556 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.62□□□□□ -0.23
CCL20P78556 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CCL20P78556 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.62□□□□□ -0.23
CCL20P78556 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 AL023875.1-201ENST00000640777 796 ntBASIC13.62□□□□□ -0.23
CCL20P78556 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.62□□□□□ -0.23
CCL20P78556 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL20P78556 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CCL20P78556 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CCL20P78556 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.62□□□□□ -0.23
CCL20P78556 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL20P78556 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CCL20P78556 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL20P78556 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CCL20P78556 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.61□□□□□ -0.23
CCL20P78556 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL20P78556 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL20P78556 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL20P78556 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL20P78556 CROCCP5-201ENST00000436658 830 ntBASIC13.61□□□□□ -0.23
CCL20P78556 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.61□□□□□ -0.23
CCL20P78556 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL20P78556 AP002982.1-201ENST00000492365 877 ntBASIC13.61□□□□□ -0.23
CCL20P78556 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL20P78556 AC124947.2-201ENST00000547118 1133 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms