Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.38■□□□□ 0.21
GABREP78334 AL390955.2-201ENST00000603032 514 ntBASIC16.38■□□□□ 0.21
GABREP78334 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.38■□□□□ 0.21
GABREP78334 SPDYE10P-202ENST00000612005 668 ntBASIC16.38■□□□□ 0.21
GABREP78334 SPDYE8P-202ENST00000612377 668 ntBASIC16.38■□□□□ 0.21
GABREP78334 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.38■□□□□ 0.21
GABREP78334 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GABREP78334 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.38■□□□□ 0.21
GABREP78334 AL390961.4-201ENST00000623958 2535 ntBASIC16.38■□□□□ 0.21
GABREP78334 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
GABREP78334 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.37■□□□□ 0.21
GABREP78334 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GABREP78334 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GABREP78334 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.37■□□□□ 0.21
GABREP78334 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GABREP78334 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GABREP78334 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GABREP78334 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GABREP78334 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.37■□□□□ 0.21
GABREP78334 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
GABREP78334 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.37■□□□□ 0.21
GABREP78334 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GABREP78334 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.37■□□□□ 0.21
GABREP78334 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GABREP78334 AL355306.1-201ENST00000415580 579 ntBASIC16.37■□□□□ 0.21
GABREP78334 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.37■□□□□ 0.21
GABREP78334 CNN2P2-201ENST00000443536 909 ntBASIC16.37■□□□□ 0.21
GABREP78334 CNN2P3-201ENST00000450201 906 ntBASIC16.37■□□□□ 0.21
GABREP78334 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.37■□□□□ 0.21
GABREP78334 FAM86C2P-203ENST00000528684 1004 ntBASIC16.37■□□□□ 0.21
GABREP78334 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GABREP78334 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.37■□□□□ 0.21
GABREP78334 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.37■□□□□ 0.21
GABREP78334 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.37■□□□□ 0.21
GABREP78334 AL136317.3-201ENST00000618497 906 ntBASIC16.37■□□□□ 0.21
GABREP78334 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GABREP78334 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GABREP78334 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.37■□□□□ 0.21
GABREP78334 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.37■□□□□ 0.21
GABREP78334 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GABREP78334 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
GABREP78334 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GABREP78334 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GABREP78334 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
GABREP78334 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.37■□□□□ 0.21
GABREP78334 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GABREP78334 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
GABREP78334 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
GABREP78334 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.36■□□□□ 0.21
GABREP78334 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
GABREP78334 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
GABREP78334 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 AL671277.1-201ENST00000429656 993 ntBASIC16.36■□□□□ 0.21
GABREP78334 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.36■□□□□ 0.21
GABREP78334 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.36■□□□□ 0.21
GABREP78334 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.36■□□□□ 0.21
GABREP78334 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.36■□□□□ 0.21
GABREP78334 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
GABREP78334 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.36■□□□□ 0.21
GABREP78334 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
GABREP78334 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
GABREP78334 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
GABREP78334 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.35■□□□□ 0.21
GABREP78334 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GABREP78334 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms