Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
VSX2P58304 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.56■□□□□ 0.24
VSX2P58304 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VSX2P58304 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VSX2P58304 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.55■□□□□ 0.24
VSX2P58304 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VSX2P58304 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
VSX2P58304 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VSX2P58304 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VSX2P58304 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.55■□□□□ 0.24
VSX2P58304 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VSX2P58304 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VSX2P58304 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VSX2P58304 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.55■□□□□ 0.24
VSX2P58304 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.55■□□□□ 0.24
VSX2P58304 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.55■□□□□ 0.24
VSX2P58304 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.55■□□□□ 0.24
VSX2P58304 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.55■□□□□ 0.24
VSX2P58304 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.55■□□□□ 0.24
VSX2P58304 BX640515.1-201ENST00000617215 977 ntBASIC16.55■□□□□ 0.24
VSX2P58304 MIR1199-201ENST00000621445 119 ntBASIC16.55■□□□□ 0.24
VSX2P58304 AC004706.3-202ENST00000621574 984 ntBASIC16.55■□□□□ 0.24
VSX2P58304 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.55■□□□□ 0.24
VSX2P58304 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VSX2P58304 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VSX2P58304 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VSX2P58304 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
VSX2P58304 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VSX2P58304 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.55■□□□□ 0.24
VSX2P58304 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
VSX2P58304 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VSX2P58304 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.55■□□□□ 0.24
VSX2P58304 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.54■□□□□ 0.24
VSX2P58304 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
VSX2P58304 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.54■□□□□ 0.24
VSX2P58304 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
VSX2P58304 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.54■□□□□ 0.24
VSX2P58304 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.54■□□□□ 0.24
VSX2P58304 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.54■□□□□ 0.24
VSX2P58304 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.54■□□□□ 0.24
VSX2P58304 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.54■□□□□ 0.24
VSX2P58304 AL022342.1-201ENST00000400363 863 ntBASIC16.54■□□□□ 0.24
VSX2P58304 AC098831.1-202ENST00000438821 336 ntBASIC16.54■□□□□ 0.24
VSX2P58304 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.54■□□□□ 0.24
VSX2P58304 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.54■□□□□ 0.24
VSX2P58304 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.54■□□□□ 0.24
VSX2P58304 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.54■□□□□ 0.24
VSX2P58304 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.54■□□□□ 0.24
VSX2P58304 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
VSX2P58304 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.54■□□□□ 0.24
VSX2P58304 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
VSX2P58304 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 AL356488.2-201ENST00000602755 427 ntBASIC16.54■□□□□ 0.24
VSX2P58304 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
VSX2P58304 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
VSX2P58304 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
VSX2P58304 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VSX2P58304 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
VSX2P58304 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.53■□□□□ 0.24
VSX2P58304 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.53■□□□□ 0.24
VSX2P58304 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.53■□□□□ 0.24
VSX2P58304 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VSX2P58304 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VSX2P58304 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
VSX2P58304 AC006504.4-201ENST00000592118 1568 ntBASIC16.53■□□□□ 0.24
VSX2P58304 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VSX2P58304 ELK2BP-201ENST00000415014 1224 ntBASIC16.53■□□□□ 0.24
VSX2P58304 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.53■□□□□ 0.24
VSX2P58304 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.53■□□□□ 0.24
VSX2P58304 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.53■□□□□ 0.24
VSX2P58304 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
VSX2P58304 AL139424.1-201ENST00000607572 797 ntBASIC16.53■□□□□ 0.24
VSX2P58304 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VSX2P58304 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms